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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015889024.1_cds_XP_016443672.1_38809
CDS Infomation

[gene=LOC107769013] [db_xref=GeneID:107769013] [protein=carboxyl-terminal-processing peptidase 3, chloroplastic-like] [protein_id=XP_016443672.1] [location=join(28817..29158,29606..29687,29805..29935,30264..30350,30516..30594,31017..31105,31426..31458,31611..31730,31840..31926,32038..32187,32318..32425,32717..32968)] [gbkey=CDS]
Sequence

ATGGAAACTTTCTGCTCAAATTTTGATCTTGGATCATCAATTCCCTTTTCAATATCCAAA
TCTTTGATTAAACCAACTTCAAAATCATTATTTTCTTGTAGATTTTCACCCTTAAATCAT
GGTAAAACACCAAGATTTAAAGGGGTTGTTCCACAAGCTTTAAGCAGGAAGGAGTCTATT
GTACAGTTCAAGAAAAATGATTTTCTTGAAAAGAATGAAAATTTGGTGAAATGGTTAGGG
AAAGGATTTGTTGGATTAGCTGCTGCTTTATCTTTGTGTTGTAATTCTCCAGCTTTGGCT
GAGTCTCTTACTGTTGCATTTCCTGTCTCTCACACACCTGAGGTAAATACAGTTCAGAGG
ACATTAATAGAGGCTTGGGGTTTGATTAGAGAAACTTTCGTAGATCCTACTTTCAACCAT
CAAGATTGGGACTTGAAATTGCAACAAACAATGGTAGAAATGTTCCCCTTGAGGTCAGAA
GATGCTGCTTATAGCAAAGTTAGGGGAATGCTATCTACGCTTGGAGATCCCTATACTCGC
ATTATTAGTCCTAAGGAGTACCAAAGTTTTAGAATAGGAAGTGATGGAAATTTGCAAGGT
GTTGGCCTCTTCGTCAGCGTTGAACCGAACACAGGGCATCTGGTTGTGTTGTCATGTGTG
GAGAATAGCCCAGCTGCACGTGCTGGTATCCATGAAGGAGATGAACTGCTTGAGATAAAT
GGGGAGAGGCTTGATGGAGTTGACAGTGAAACAGCAGCTCAAAAACTGAGGGGCCGTGCT
GGTACAATTGTTACAGTCAAAGTTCACAGTGGTAATGCTCCAGGAGTATCTGGTTACAAA
GAGGTTAAACTACCTCGCGAAGTGATTAAGCTTTCGCCAATATCCAGTGCCATCATCCCT
CATAAAATGCCTGATGGTCGTCTCTTGAAAACTGGATATGTGAAGTTGTCAAGCTTCTCT
CAGTCTGCTGCTATGGACATGGAAAACACAATTCAGGATATGGAAACTCAGGGTGTGCAA
TCATATATATTAGATCTTCGGAACAATCCTGGAGGTCTGGTTACTGCCGGACTAGATGTT
GCCCAAATATGGCTAGATGGCGATGAGACACTTGTGAACACCATAGATAGGGATGGAAAT
ATGCTACCAATTAGCATGGTTGATGGACATGCTGTGACACACGATCCACTAGTCGTCCTT
GTGAATGAGGGGAGTGCAAGTGCTAGTGAGATTCTTGCCGGAGCACTCCATGATAATGGC
CGTGCAATCCTTGTTGGGCATAAGACTTTTGGCAAAGGAAAGATACAGAGTGTTACACAG
TTGCACGACGGATCAGCTCTATTTGTTACGGTGGCTAAGTATTTATCTCCAGCACTTCAC
GACATCGATCAAGTGGGAATAACACCTGATGTTCAGTGTACAGTTGACATGCTTAATTCA
CCCAAAGACACCTTCAAGAACAAGAGCTCATCCTCGTCATCGTCTTTGGAGGCTGATTCT
TGCATCATTGTTGCAGAACATGAATTGGATATTCAAAAATCCAAGGGCTCTGCTTCTTGA

Peptide Sequence

PEP ID

XP_016443672.1
PEP Infomation

PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic-like [Nicotiana tabacum]
Sequence

METFCSNFDLGSSIPFSISKSLIKPTSKSLFSCRFSPLNHGKTPRFKGVVPQALSRKESI
VQFKKNDFLEKNENLVKWLGKGFVGLAAALSLCCNSPALAESLTVAFPVSHTPEVNTVQR
TLIEAWGLIRETFVDPTFNHQDWDLKLQQTMVEMFPLRSEDAAYSKVRGMLSTLGDPYTR
IISPKEYQSFRIGSDGNLQGVGLFVSVEPNTGHLVVLSCVENSPAARAGIHEGDELLEIN
GERLDGVDSETAAQKLRGRAGTIVTVKVHSGNAPGVSGYKEVKLPREVIKLSPISSAIIP
HKMPDGRLLKTGYVKLSSFSQSAAMDMENTIQDMETQGVQSYILDLRNNPGGLVTAGLDV
AQIWLDGDETLVNTIDRDGNMLPISMVDGHAVTHDPLVVLVNEGSASASEILAGALHDNG
RAILVGHKTFGKGKIQSVTQLHDGSALFVTVAKYLSPALHDIDQVGITPDVQCTVDMLNS
PKDTFKNKSSSSSSSLEADSCIIVAEHELDIQKSKGSAS

Transcript Sequence

Gene sequence data has not been registered.